TY  - JOUR
A1  - Read, Betsy A.
A1  - Kegel, Jessica
A1  - Klute, Mary J.
A1  - Kuo, Alan
A1  - Lefebvre, Stephane C.
A1  - Maumus, Florian
A1  - Mayer, Christoph
A1  - Miller, John
A1  - Monier, Adam
A1  - Salamov, Asaf
A1  - Young, Jeremy
A1  - Aguilar, Maria
A1  - Claverie, Jean-Michel
A1  - Frickenhaus, Stephan
A1  - Gonzalez, Karina
A1  - Herman, Emily K.
A1  - Lin, Yao-Cheng
A1  - Napier, Johnathan
A1  - Ogata, Hiroyuki
A1  - Sarno, Analissa F.
A1  - Shmutz, Jeremy
A1  - Schroeder, Declan
A1  - de Vargas, Colomban
A1  - Verret, Frederic
A1  - von Dassow, Peter
A1  - Valentin, Klaus
A1  - Van de Peer, Yves
A1  - Wheeler, Glen
A1  - Dacks, Joel B.
A1  - Delwiche, Charles F.
A1  - Dyhrman, Sonya T.
A1  - Glöckner, Gernot
A1  - John, Uwe
A1  - Richards, Thomas
A1  - Worden, Alexandra Z.
A1  - Zhang, Xiaoyu
A1  - Grigoriev, Igor V.
A1  - Allen, Andrew E.
A1  - Bidle, Kay
A1  - Borodovsky, M.
A1  - Bowler, C.
A1  - Brownlee, Colin
A1  - Cock, J. Mark
A1  - Elias, Marek
A1  - Gladyshev, Vadim N.
A1  - Groth, Marco
A1  - Guda, Chittibabu
A1  - Hadaegh, Ahmad
A1  - Iglesias-Rodriguez, Maria Debora
A1  - Jenkins, J.
A1  - Jones, Bethan M.
A1  - Lawson, Tracy
A1  - Leese, Florian
A1  - Lindquist, Erika
A1  - Lobanov, Alexei
A1  - Lomsadze, Alexandre
A1  - Malik, Shehre-Banoo
A1  - Marsh, Mary E.
A1  - Mackinder, Luke
A1  - Mock, Thomas
A1  - Müller-Röber, Bernd
A1  - Pagarete, Antonio
A1  - Parker, Micaela
A1  - Probert, Ian
A1  - Quesneville, Hadi
A1  - Raines, Christine
A1  - Rensing, Stefan A.
A1  - Riano-Pachon, Diego Mauricio
A1  - Richier, Sophie
A1  - Rokitta, Sebastian
A1  - Shiraiwa, Yoshihiro
A1  - Soanes, Darren M.
A1  - van der Giezen, Mark
A1  - Wahlund, Thomas M.
A1  - Williams, Bryony
A1  - Wilson, Willie
A1  - Wolfe, Gordon
A1  - Wurch, Louie L.
T1  - Pan genome of the phytoplankton Emiliania underpins its global distribution
JF  - Nature : the international weekly journal of science
N2  - Coccolithophores have influenced the global climate for over 200 million years(1). These marine phytoplankton can account for 20 per cent of total carbon fixation in some systems(2). They form blooms that can occupy hundreds of thousands of square kilometres and are distinguished by their elegantly sculpted calcium carbonate exoskeletons (coccoliths), rendering them visible from space(3). Although coccolithophores export carbon in the form of organic matter and calcite to the sea floor, they also release CO2 in the calcification process. Hence, they have a complex influence on the carbon cycle, driving either CO2 production or uptake, sequestration and export to the deep ocean(4). Here we report the first haptophyte reference genome, from the coccolithophore Emiliania huxleyi strain CCMP1516, and sequences from 13 additional isolates. Our analyses reveal a pan genome (core genes plus genes distributed variably between strains) probably supported by an atypical complement of repetitive sequence in the genome. Comparisons across strains demonstrate that E. huxleyi, which has long been considered a single species, harbours extensive genome variability reflected in different metabolic repertoires. Genome variability within this species complex seems to underpin its capacity both to thrive in habitats ranging from the equator to the subarctic and to form large-scale episodic blooms under a wide variety of environmental conditions.
Y1  - 2013
U6  - https://doi.org/10.1038/nature12221
SN  - 0028-0836
SN  - 1476-4687
VL  - 499
IS  - 7457
SP  - 209
EP  - 213
PB  - Nature Publ. Group
CY  - London
ER  - 
TY  - JOUR
A1  - De Frenne, Pieter
A1  - Rodriguez-Sanchez, Francisco
A1  - Coomes, David Anthony
A1  - Bäten, Lander
A1  - Versträten, Gorik
A1  - Vellend, Mark
A1  - Bernhardt-Römermann, Markus
A1  - Brown, Carissa D.
A1  - Brunet, Jörg
A1  - Cornelis, Johnny
A1  - Decocq, Guillaume M.
A1  - Dierschke, Hartmut
A1  - Eriksson, Ove
A1  - Gilliam, Frank S.
A1  - Hedl, Radim
A1  - Heinken, Thilo
A1  - Hermy, Martin
A1  - Hommel, Patrick
A1  - Jenkins, Michael A.
A1  - Kelly, Daniel L.
A1  - Kirby, Keith J.
A1  - Mitchell, Fraser J. G.
A1  - Naaf, Tobias
A1  - Newman, Miles
A1  - Peterken, George
A1  - Petrik, Petr
A1  - Schultz, Jan
A1  - Sonnier, Gregory
A1  - Van Calster, Hans
A1  - Waller, Donald M.
A1  - Walther, Gian-Reto
A1  - White, Peter S.
A1  - Woods, Kerry D.
A1  - Wulf, Monika
A1  - Graae, Bente Jessen
A1  - Verheyen, Kris
T1  - Microclimate moderates plant responses to macroclimate warming
JF  - Proceedings of the National Academy of Sciences of the United States of America
N2  - Recent global warming is acting across marine, freshwater, and terrestrial ecosystems to favor species adapted to warmer conditions and/or reduce the abundance of cold-adapted organisms (i.e., "thermophilization" of communities). Lack of community responses to increased temperature, however, has also been reported for several taxa and regions, suggesting that "climatic lags" may be frequent. Here we show that microclimatic effects brought about by forest canopy closure can buffer biotic responses to macroclimate warming, thus explaining an apparent climatic lag. Using data from 1,409 vegetation plots in European and North American temperate forests, each surveyed at least twice over an interval of 12-67 y, we document significant thermophilization of ground-layer plant communities. These changes reflect concurrent declines in species adapted to cooler conditions and increases in species adapted to warmer conditions. However, thermophilization, particularly the increase of warm-adapted species, is attenuated in forests whose canopies have become denser, probably reflecting cooler growing-season ground temperatures via increased shading. As standing stocks of trees have increased in many temperate forests in recent decades, local microclimatic effects may commonly be moderating the impacts of macroclimate warming on forest understories. Conversely, increases in harvesting woody biomass-e.g., for bioenergy-may open forest canopies and accelerate thermophilization of temperate forest biodiversity.
KW  - climate change
KW  - forest management
KW  - understory
KW  - climatic debt
KW  - range shifts
Y1  - 2013
U6  - https://doi.org/10.1073/pnas.1311190110
SN  - 0027-8424
VL  - 110
IS  - 46
SP  - 18561
EP  - 18565
PB  - National Acad. of Sciences
CY  - Washington
ER  - 
TY  - JOUR
A1  - Eigmüller, Philipp
A1  - Chaushev, Alexander
A1  - Gillen, Edward
A1  - Smith, Alexis
A1  - Nielsen, Louise D.
A1  - Turner, Oliver
A1  - Csizmadia, Szilard
A1  - Smalley, Barry
A1  - Bayliss, Daniel
A1  - Belardi, Claudia
A1  - Bouchy, Francois
A1  - Burleigh, Matthew R.
A1  - Cabrera, Juan
A1  - Casewell, Sarah L.
A1  - Chazelas, Bruno
A1  - Cooke, Benjamin F.
A1  - Erikson, Anders
A1  - Gansicke, Boris T.
A1  - Guenther, Maximilian N.
A1  - Goad, Michael R.
A1  - Grange, Andrew
A1  - Jackman, James A. G.
A1  - Jenkins, James S.
A1  - McCormac, James
A1  - Moyano, Maximiliano
A1  - Pollacco, Don
A1  - Poppenhäger, Katja
A1  - Queloz, Didier
A1  - Raynard, Liam
A1  - Rauer, Heike
A1  - Udry, Stephane
A1  - Walker, Simon. R.
A1  - Watson, Christopher A.
A1  - West, Richard G.
A1  - Wheatley, Peter J.
T1  - NGTS-5b
BT  - a highly inflated planet offering insights into the sub-Jovian desert
JF  - Astronomy and astrophysics : an international weekly journal
N2  - Context. Planetary population analysis gives us insight into formation and evolution processes. For short-period planets, the sub-Jovian desert has been discussed in recent years with regard to the planet population in the mass/period and radius/period parameter space without taking stellar parameters into account. The Next Generation Transit Survey (NGTS) is optimised for detecting planets in this regime, which allows for further analysis of the sub-Jovian desert. Aims. With high-precision photometric surveys (e.g. with NGTS and TESS), which aim to detect short period planets especially around M/K-type host stars, stellar parameters need to be accounted for when empirical data are compared to model predictions. Presenting a newly discovered planet at the boundary of the sub-Jovian desert, we analyse its bulk properties and use it to show the properties of exoplanets that border the sub-Jovian desert. Methods. Using NGTS light curve and spectroscopic follow-up observations, we confirm the planetary nature of planet NGTS-5b and determine its mass. Using exoplanet archives, we set the planet in context with other discoveries. Results. NGTS-5b is a short-period planet with an orbital period of 3.3569866 +/- 0.0000026 days. With a mass of 0.229 +/- 0.037 M-Jup and a radius of 1.136 +/- 0.023 R-Jup, it is highly inflated. Its mass places it at the upper boundary of the sub-Jovian desert. Because the host is a K2 dwarf, we need to account for the stellar parameters when NGTS-5b is analysed with regard to planet populations. Conclusions. With red-sensitive surveys (e.g. with NGTS and TESS), we expect many more planets around late-type stars to be detected. An empirical analysis of the sub-Jovian desert should therefore take stellar parameters into account.
KW  - planets and satellites: detection
KW  - planets and satellites: gaseous planets
Y1  - 2019
U6  - https://doi.org/10.1051/0004-6361/201935206
SN  - 1432-0746
VL  - 625
PB  - EDP Sciences
CY  - Les Ulis
ER  -