@inproceedings{BorowskiGlowinskiFristeretal.2018, author = {Borowski, Andreas and Glowinski, Ingrid and Frister, Jonas and H{\"o}ttecke, Dietmar and Buth, Katrin and Koenen, Jenna and Masanek, Nicole and Reichwein, Wilko and Scholten, Nina and Sprenger, Sandra and Stender, Peter and W{\"o}hlke, Carina and Komorek, Michael and Freckmann, Janine and Hofmann, Josefine and Niesel, Verena and Richter, Chris and Mehlmann, Nelli and Bikner-Ahsbahs, Angelika and Unverricht, Katja and Schanze, Sascha and Bittorf, Robert Marten and Meier, Monique and Grospietsch, Finja and Mayer, J{\"u}rgen and Gimbel, Katharina and Ziepprecht, Kathrin and Hofmann, Judith and Kramer, Charlotte and M{\"u}ller, Britta-Kornelia and Rohde, Andreas and Z{\"u}hlsdorf, Felix and Winkler, Iris and Laging, Ralf and Peter, Carina and Schween, Michael and H{\"a}rle, Gerhard and Busse, Beatrix and Mahner, Sebastian and K{\"o}stler, Verena and Kufner, Sabrina and M{\"a}gdefrau, Jutta and M{\"u}ller, Christian and Beck, Christina and Kriehuber, Eva and Boch, Florian and Engl, Anna-Teresa and Helzel, Andreas and Pickert, Tina and Reiter, Christian and Blasini, Bettina and Nerdel, Claudia and Lewalter, Doris and Schiffhauer, Silke and Richter-Gebert, J{\"u}rgen and Bannert, Maria and Maahs, Mirjam and Reißner, Maria and Ungar, Patrizia and von Wachter, Jana-Kristin and Hellmann, Katharina and Zaki, Katja and Pohlenz, Philipp}, title = {Koh{\"a}renz in der universit{\"a}ren Lehrerbildung}, editor = {Glowinski, Ingrid and Borowski, Andreas and Gillen, Julia and Schanze, Sascha and von Meien, Joachim}, publisher = {Universit{\"a}tsverlag Potsdam}, address = {Potsdam}, isbn = {978-3-86956-438-8}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-414267}, year = {2018}, abstract = {One area that is supported by the project "Qualit{\"a}tsoffensive Lehrerbildung" (funded by BMBF) is the improvement of collaboration and coordination between studies in the discipline, studies in pedagogical content knowledge, and studies in pedagogical knowledge during teacher education at university. Aiming a better coordination among these three parts of teacher education at university, many of the supported projects have designed and realized university-specific approaches. This conference proceedings volume comprises contributions by 15 of these projects. Seven of those were introduced and discussed in workshops on the occasion of two cross-regional project-conferences in Hannover and Potsdam. Overall, the contributions give a theoretically funded as well as a practice-oriented overview of current approaches and concepts to achieve a better connection between study units concerning studies in content knowledge, pedagogical content knowledge and pedagogical knowledge in teacher education. The volume presents university projects, which take effect on different levels (at the level of curriculum and content, at a collegiate level, at the level of structural conditions of universities). The different approaches are described in a way that they can provide a basis for transfer to other subjects or further universities. The contributions are aimed at teacher educators as well as other actors working in the field of teaching- and quality development at universities. All of them can take transferable ideas and impulses from the described concepts and formats.}, language = {de} } @article{WarringtonBeaumontHorikoshietal.2019, author = {Warrington, Nicole and Beaumont, Robin and Horikoshi, Momoko and Day, Felix R. and Helgeland, {\O}yvind and Laurin, Charles and Bacelis, Jonas and Peng, Shouneng and Hao, Ke and Feenstra, Bjarke and Wood, Andrew R. and Mahajan, Anubha and Tyrrell, Jessica and Robertson, Neil R. and Rayner, N. William and Qiao, Zhen and Moen, Gunn-Helen and Vaudel, Marc and Marsit, Carmen and Chen, Jia and Nodzenski, Michael and Schnurr, Theresia M. and Zafarmand, Mohammad Hadi and Bradfield, Jonathan P. and Grarup, Niels and Kooijman, Marjolein N. and Li-Gao, Ruifang and Geller, Frank and Ahluwalia, Tarunveer Singh and Paternoster, Lavinia and Rueedi, Rico and Huikari, Ville and Hottenga, Jouke-Jan and Lyytik{\"a}inen, Leo-Pekka and Cavadino, Alana and Metrustry, Sarah and Cousminer, Diana L. and Wu, Ying and Thiering, Elisabeth Paula and Wang, Carol A. and Have, Christian Theil and Vilor-Tejedor, Natalia and Joshi, Peter K. and Painter, Jodie N. and Ntalla, Ioanna and Myhre, Ronny and Pitk{\"a}nen, Niina and van Leeuwen, Elisabeth M. and Joro, Raimo and Lagou, Vasiliki and Richmond, Rebecca C. and Espinosa, Ana and Barton, Sheila J. and Inskip, Hazel M. and Holloway, John W. and Santa-Marina, Loreto and Estivill, Xavier and Ang, Wei and Marsh, Julie A. and Reichetzeder, Christoph and Marullo, Letizia and Hocher, Berthold and Lunetta, Kathryn L. and Murabito, Joanne M. and Relton, Caroline L. and Kogevinas, Manolis and Chatzi, Leda and Allard, Catherine and Bouchard, Luigi and Hivert, Marie-France and Zhang, Ge and Muglia, Louis J. and Heikkinen, Jani and Morgen, Camilla S. and van Kampen, Antoine H. C. and van Schaik, Barbera D. C. and Mentch, Frank D. and Langenberg, Claudia and Scott, Robert A. and Zhao, Jing Hua and Hemani, Gibran and Ring, Susan M. and Bennett, Amanda J. and Gaulton, Kyle J. and Fernandez-Tajes, Juan and van Zuydam, Natalie R. and Medina-Gomez, Carolina and de Haan, Hugoline G. and Rosendaal, Frits R. and Kutalik, Zolt{\´a}n and Marques-Vidal, Pedro and Das, Shikta and Willemsen, Gonneke and Mbarek, Hamdi and M{\"u}ller-Nurasyid, Martina and Standl, Marie and Appel, Emil V. R. and Fonvig, Cilius Esmann and Trier, Caecilie and van Beijsterveldt, Catharina E. M. and Murcia, Mario and Bustamante, Mariona and Bon{\`a}s-Guarch, S{\´i}lvia and Hougaard, David M. and Mercader, Josep M. and Linneberg, Allan and Schraut, Katharina E. and Lind, Penelope A. and Medland, Sarah Elizabeth and Shields, Beverley M. and Knight, Bridget A. and Chai, Jin-Fang and Panoutsopoulou, Kalliope and Bartels, Meike and S{\´a}nchez, Friman and Stokholm, Jakob and Torrents, David and Vinding, Rebecca K. and Willems, Sara M. and Atalay, Mustafa and Chawes, Bo L. and Kovacs, Peter and Prokopenko, Inga and Tuke, Marcus A. and Yaghootkar, Hanieh and Ruth, Katherine S. and Jones, Samuel E. and Loh, Po-Ru and Murray, Anna and Weedon, Michael N. and T{\"o}njes, Anke and Stumvoll, Michael and Michaelsen, Kim Fleischer and Eloranta, Aino-Maija and Lakka, Timo A. and van Duijn, Cornelia M. and Kiess, Wieland and Koerner, Antje and Niinikoski, Harri and Pahkala, Katja and Raitakari, Olli T. and Jacobsson, Bo and Zeggini, Eleftheria and Dedoussis, George V. and Teo, Yik-Ying and Saw, Seang-Mei and Montgomery, Grant W. and Campbell, Harry and Wilson, James F. and Vrijkotte, Tanja G. M. and Vrijheid, Martine and de Geus, Eco J. C. N. and Hayes, M. Geoffrey and Kadarmideen, Haja N. and Holm, Jens-Christian and Beilin, Lawrence J. and Pennell, Craig E. and Heinrich, Joachim and Adair, Linda S. and Borja, Judith B. and Mohlke, Karen L. and Eriksson, Johan G. and Widen, Elisabeth E. and Hattersley, Andrew T. and Spector, Tim D. and Kaehoenen, Mika and Viikari, Jorma S. and Lehtimaeki, Terho and Boomsma, Dorret I. and Sebert, Sylvain and Vollenweider, Peter and Sorensen, Thorkild I. A. and Bisgaard, Hans and Bonnelykke, Klaus and Murray, Jeffrey C. and Melbye, Mads and Nohr, Ellen A. and Mook-Kanamori, Dennis O. and Rivadeneira, Fernando and Hofman, Albert and Felix, Janine F. and Jaddoe, Vincent W. V. and Hansen, Torben and Pisinger, Charlotta and Vaag, Allan A. and Pedersen, Oluf and Uitterlinden, Andre G. and Jarvelin, Marjo-Riitta and Power, Christine and Hypponen, Elina and Scholtens, Denise M. and Lowe, William L. and Smith, George Davey and Timpson, Nicholas J. and Morris, Andrew P. and Wareham, Nicholas J. and Hakonarson, Hakon and Grant, Struan F. A. and Frayling, Timothy M. and Lawlor, Debbie A. and Njolstad, Pal R. and Johansson, Stefan and Ong, Ken K. and McCarthy, Mark I. and Perry, John R. B. and Evans, David M. and Freathy, Rachel M.}, title = {Maternal and fetal genetic effects on birth weight and their relevance to cardio-metabolic risk factors}, series = {Nature genetics}, volume = {51}, journal = {Nature genetics}, number = {5}, publisher = {Nature Publ. Group}, address = {New York}, organization = {EGG Consortium}, issn = {1061-4036}, pages = {804 -- +}, year = {2019}, abstract = {Birth weight variation is influenced by fetal and maternal genetic and non-genetic factors, and has been reproducibly associated with future cardio-metabolic health outcomes. In expanded genome-wide association analyses of own birth weight (n = 321,223) and offspring birth weight (n = 230,069 mothers), we identified 190 independent association signals (129 of which are novel). We used structural equation modeling to decompose the contributions of direct fetal and indirect maternal genetic effects, then applied Mendelian randomization to illuminate causal pathways. For example, both indirect maternal and direct fetal genetic effects drive the observational relationship between lower birth weight and higher later blood pressure: maternal blood pressure-raising alleles reduce offspring birth weight, but only direct fetal effects of these alleles, once inherited, increase later offspring blood pressure. Using maternal birth weight-lowering genotypes to proxy for an adverse intrauterine environment provided no evidence that it causally raises offspring blood pressure, indicating that the inverse birth weight-blood pressure association is attributable to genetic effects, and not to intrauterine programming.}, language = {en} } @misc{BaumannArndtMueller2013, author = {Baumann, Tobias and Arndt, Katja Maren and M{\"u}ller, Kristian M.}, title = {Directional cloning of DNA fragments using deoxyinosine-containing oligonucleotides and endonuclease V}, series = {Postprints der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe}, journal = {Postprints der Universit{\"a}t Potsdam : Mathematisch-Naturwissenschaftliche Reihe}, number = {983}, issn = {1866-8372}, doi = {10.25932/publishup-43108}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-431085}, pages = {13}, year = {2013}, abstract = {Background: DNA fragments carrying internal recognition sites for the restriction endonucleases intended for cloning into a target plasmid pose a challenge for conventional cloning. Results: A method for directional insertion of DNA fragments into plasmid vectors has been developed. The target sequence is amplified from a template DNA sample by PCR using two oligonucleotides each containing a single deoxyinosine base at the third position from the 5' end. Treatment of such PCR products with endonuclease V generates 3' protruding ends suitable for ligation with vector fragments created by conventional restriction endonuclease reactions. Conclusions: The developed approach generates terminal cohesive ends without the use of Type II restriction endonucleases, and is thus independent from the DNA sequence. Due to PCR amplification, minimal amounts of template DNA are required. Using the robust Taq enzyme or a proofreading Pfu DNA polymerase mutant, the method is applicable to a broad range of insert sequences. Appropriate primer design enables direct incorporation of terminal DNA sequence modifications such as tag addition, insertions, deletions and mutations into the cloning strategy. Further, the restriction sites of the target plasmid can be either retained or removed.}, language = {en} } @article{MuellerNedielkovArndt2022, author = {M{\"u}ller, Marik and Nedielkov, Ruslan and Arndt, Katja M.}, title = {Strategies for Enzymatic Inactivation of the Veterinary Antibiotic Florfenicol}, series = {Antibiotics}, volume = {11}, journal = {Antibiotics}, number = {4}, publisher = {MDPI}, address = {Basel, Schweiz}, issn = {2079-6382}, doi = {10.3390/antibiotics11040443}, pages = {1 -- 18}, year = {2022}, abstract = {Large quantities of the antibiotic florfenicol are used in animal farming and aquaculture, contaminating the ecosystem with antibiotic residues and promoting antimicrobial resistance, ultimately leading to untreatable multidrug-resistant pathogens. Florfenicol-resistant bacteria often activate export mechanisms that result in resistance to various structurally unrelated antibiotics. We devised novel strategies for the enzymatic inactivation of florfenicol in different media, such as saltwater or milk. Using a combinatorial approach and selection, we optimized a hydrolase (EstDL136) for florfenicol cleavage. Reaction kinetics were followed by time-resolved NMR spectroscopy. Importantly, the hydrolase remained active in different media, such as saltwater or cow milk. Various environmentally-friendly application strategies for florfenicol inactivation were developed using the optimized hydrolase. As a potential filter device for cost-effective treatment of waste milk or aquacultural wastewater, the hydrolase was immobilized on Ni-NTA agarose or silica as carrier materials. In two further application examples, the hydrolase was used as cell extract or encapsulated with a semi-permeable membrane. This facilitated, for example, florfenicol inactivation in whole milk, which can help to treat waste milk from medicated cows, to be fed to calves without the risk of inducing antibiotic resistance. Enzymatic inactivation of antibiotics, in general, enables therapeutic intervention without promoting antibiotic resistance.}, language = {en} } @misc{Mueller2008, type = {Master Thesis}, author = {M{\"u}ller, Katja}, title = {Warum lehren Dozenten nebenberuflich in der Erwachsenenbildung?}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-20050}, school = {Universit{\"a}t Potsdam}, year = {2008}, abstract = {Diese empirisch qualitative Studie l{\"a}sst sich in die Professionalisierungsdiskussion in der Erwachsenenbildung einbetten. Vor dem Hintergrund lebenslangen Lernens und dem Wandel der Lernkultur wachsen die Anspr{\"u}che und Kompetenzanforderungen an die Lehrenden, ohne dass die Heterogenit{\"a}t des {\"u}berwiegend nebenberuflich t{\"a}tigen Personals ausreichend ber{\"u}cksichtigt wird. Um ein deutlicheres Bild von dieser Besch{\"a}ftigungsgruppe zu erhalten, fokussiert diese Magisterarbeit mit einer Fallstudie die nebenberuflichen Dozenten in der Erwachsenenbildung. Zentrale Fragestellungen sind: - Warum lehren Dozenten nebenberuflich an der Volkshochschule? - In welchem Zusammenhang stehen Haupt- und Nebenberuf? - In welcher Rolle sehen sich die Dozenten im Kursgeschehen? Anhand problemzentrierter Interviews wurden zwei Einzelfallstudien mit anschließender Typenbildung durchgef{\"u}hrt. Die Rekonstruktion der Beweggr{\"u}nde und Bedeutungshorizonte der Dozenten f{\"u}r ihre T{\"a}tigkeit gelang mittels dem Forschungsverfahren der Grounded Theory nach Anselm Strauss und Juliet Corbin (1996). Hierbei wurden gegenstandsbegr{\"u}ndet im induktiv-deduktiven Wechselspiel Kategorien identifiziert, ausdifferenziert und miteinander in Beziehung gesetzt. Am paradigmatischen Modell von Strauss/Corbin 1996 orientiert, ließen sich somit ein zentrales Ph{\"a}nomen, dessen Ursache, resultierende Handlungsstrategien, Konsequenzen und kontextuelle sowie intervenierende Bedingungen ausfindig machen. Erstaunlich ist bei der Gegen{\"u}berstellung der beiden F{\"a}lle die konsequente Verfolgung der jeweiligen Handlungslogik, die sich auch im professionellen Selbstverst{\"a}ndnis der Dozenten niederschl{\"a}gt.}, language = {de} } @article{TittelBorkRoepkeetal.2000, author = {Tittel, J{\"o}rg and Bork, Rudolf and R{\"o}pke, Bj{\"o}rn and Geldmacher, Karl and Schnur, Tilo and Faust, Berno and Schaphoff, Sibyll and Dalchow, Claus and Woithe, Franka and Bronstert, Axel and Jeltsch, Florian and Jessel, Beate and Zschalich, Andrea and R{\"o}ßling, Holger and Spindler, Joris and Gaedke, Ursula and Tielb{\"o}rger, Katja and Kadmon, R. and M{\"u}ller, J. and Bissinger, Vera and Weithoff, Guntram and Wallschl{\"a}ger, Hans-Dieter and Wiegleb, Gerhard}, title = {Umweltforschung f{\"u}r das Land Brandenburg}, series = {Brandenburgische Umwelt-Berichte : BUB ; Schriftenreihe der Mathematisch-Naturwissenschaftlichen Fakult{\"a}t der Universit{\"a}t Potsdam}, volume = {8}, journal = {Brandenburgische Umwelt-Berichte : BUB ; Schriftenreihe der Mathematisch-Naturwissenschaftlichen Fakult{\"a}t der Universit{\"a}t Potsdam}, issn = {1434-2375}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-3828}, pages = {80 -- 134}, year = {2000}, abstract = {BISSINGER, V.; TITTEL, J.: Process rates and growth limiting factors of planktonic algae (Chlamydomonas sp.) from extremely acidic (pH 2,5 - 3) mining lakes in Germany ; BORK, H.-R. et al.: Erodierte Autos und Brunnen in Oregon, USA ; BRONSTERT, A. et al.: Bewirtschaftunsm{\"o}glichkeiten im Einzugsgebiet der Havel ; JELTSCH, F. et al.: Beweidung als Degradationsfaktor in ariden und semiariden Weidesystemen ; JELTSCH, F. et al.: Entstehung und Bedeutung r{\"a}umlicher Vegetationsstrukturen in Trockensavannen: Baum-Graskoexistenz und Artenvielfalt ; JESSEL, B. et al.: Bodenbewertung f{\"u}r Planungs- und Zulassungsverfahren in Brandenburg ; JESSEL, B.; ZSCHALICH, A.: Erarbeitung von Ausgleichs- und Ersatzmaßnahmen f{\"u}r die Wert- und Funktionselemente des Landschaftsbildes ; R{\"O}ßLING, H. et al.: Umsetzung von Ausgleichs- und Ersatzmaßnahmen beim Ausbau der Bundesautobahn A 9 ; SPINDLER, J.; GAEDKE, U.: Estimating production in plankton food webs from biomass size spectra and allometric relationships ; TIELB{\"O}RGER, K. et al.: Sukzessionsprozesse in einem Sandd{\"u}nengebiet nach Ausschluß von Beweidung ; TIELB{\"O}RGER, K. et al.: Populationsdynamische Funktionen von Ausbreitung und Dormanz ; TIELB{\"O}RGER, K. et al.: Raum-zeitliche Populationsdynamik von einj{\"a}hrigen W{\"u}stenpflanzen ; TITTEL, J. et al.: Ressourcennutzung und -weitergabe im planktischen Nahrungsnetz eines extrem sauren (pH 2,7) Tagebausees ; WALLSCHL{\"A}GER, D.; WIEGLEB, G.: Offenland-Management auf ehemaligen und in Nutzung befindlichen Truppen{\"u}bungspl{\"a}tzen im pleistoz{\"a}nen Flachland Nordostdeutschlands: Naturschutzfachliche Grundlagen und praktische Anwendungen ; WEITHOFF, G.; GAEDKE, U.: Planktische R{\"a}uber-Beute-Systeme: Experimentelle Untersuchung von {\"o}kologischen Synchronisationen}, language = {de} } @article{IntziegianniCasselKoenigetal.2015, author = {Intziegianni, Konstantina and Cassel, Michael and K{\"o}nig, Niklas and M{\"u}ller, Steffen and Fr{\"o}hlich, Katja and Mayer, Frank}, title = {Ultrasonography for the assessment of the structural properties of the Achilles tendon in asymptomatic individuals: An intra-rater reproducibility study}, series = {Isokinetics and exercise science : official journal of the European Isokinetic Society}, volume = {23}, journal = {Isokinetics and exercise science : official journal of the European Isokinetic Society}, number = {4}, publisher = {IOS Press}, address = {Amsterdam}, issn = {0959-3020}, doi = {10.3233/IES-150586}, pages = {263 -- 270}, year = {2015}, abstract = {BACKGROUND: Reproducible measurements of tendon structural properties are a prerequisite for accurate diagnosis of tendon disorders and for determination of their mechanical properties. Despite the widely used application of Ultrasonography (US) in musculoskeletal assessment, its operator dependency and lack of standardization influences the consistency of the measurement. OBJECTIVE: To evaluate the intra-rater reproducibility of a standardized US method assessing the structural properties of the Achilles tendon (AT). METHODS: Sixteen asymptomatic participants were positioned prone on an isokinetic dynamometer with the knee extended and ankle at 90. flexion. US was used to assess AT-length, cross-sectional area (CSA), and AT-elongation during isometric plantarflexion contraction. The intra-rater reproducibility was assessed by ICC (2.1), Test-Retest Variability (TRV, \%), Bland-Altman analyses (Bias +/- LoA [1.96*SD]), and Standard-Error of Measurement (SEM). RESULTS: Measurements of AT-length demonstrated an ICC of 0.93, TRV of 4.5 +/- 3.9\%, Bias +/- LoA of -2.8 +/- 25.0 mm and SEM of 6.6 mm. AT-CSA showed an ICC of 0.79, TRV of 8.7 +/- 9.6\%, Bias +/- LoA of 1.7 +/- 19.4 mm(2) and SEM of 5.3 mm(2). AT-elongation revealed an ICC of 0.92, TRV of 12.9 +/- 8.9\%, Bias +/- LoA of 0.3 +/- 5.7 mm and SEM of 1.5 mm. CONCLUSIONS: The presented methodology allows a reproducible assessment of Achilles tendon structural properties when performed by a single rater.}, language = {en} } @misc{BringmannMutanyattaComarMaksimenkaetal.2008, author = {Bringmann, Gerhard and Mutanyatta-Comar, Joan and Maksimenka, Katja and Wanjohi, John M. and Heydenreich, Matthias and Brun, Reto and M{\"u}ller, Werner E. G. and Peter, Martin and Midiwo, Jacob O. and Yenesew, Abiy}, title = {Joziknipholones A and B : the First Dimeric Phenylanthraquinones, from the Roots of Bulbine frutescens}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus-42638}, year = {2008}, abstract = {From the roots of the African plant Bulbine frutescens (Asphodelaceae), two unprecedented novel dimeric phenylanthraquinones, named joziknipholones A and B, possessing axial and centrochirality, were isolated, together with six known compounds. Structural elucidation of the new metabolites was achieved by spectroscopic and chiroptical methods, by reductive cleavage of the central bond between the monomeric phenylanthraquinone and -anthrone portions with sodium dithionite, and by quantum chemical CD calculations. Based on the recently revised absolute axial configuration of the parent phenylanthraquinones, knipholone and knipholone anthrone, the new dimers were attributed to possess the P-configuration (i.e., with the acetyl portions below the anthraquinone plane) at both axes in the case of joziknipholone A, whereas in joziknipholone B, the knipholone part was found to be M-configured. Joziknipholones A and B are active against the chloroquine resistant strain K1 of the malaria pathogen, Plasmodium falciparum, and show moderate activity against murine leukemic lymphoma L5178y cells.}, language = {en} } @misc{ThulinKrahGausemeieretal.2020, author = {Thulin, Mirjam and Krah, Markus and Gausemeier, Bernd and Mecklenburg, Frank and Oehme, Annegret and Tam{\´a}s, M{\´a}t{\´e} and Gerlach, Lisa and Gr{\"a}be, Viktoria and Wermke, Michael and Oleshkevich, Ekaterina and Arnold, Rafael D. and Wendehorst, Stephan and Talabardon, Susanne and Mays, Devi and M{\"u}ller, Judith and Herskovitz, Yaakov and Garloff, Katja and Kellenbach, Katharina von and Held, Marcus and Gr{\"o}zinger, Karl Erich}, title = {PaRDeS : Journal of the Association for Jewish Studies in Germany = Jewish Families and Kinship in the Early Modern and Modern Eras}, series = {PaRDeS : Zeitschrift der Vereinigung f{\"u}r J{\"u}dische Studien}, journal = {PaRDeS : Zeitschrift der Vereinigung f{\"u}r J{\"u}dische Studien}, number = {26}, editor = {Thulin, Mirjam and Krah, Markus and Pick, Bianca}, publisher = {Universit{\"a}tsverlag Potsdam}, address = {Potsdam}, isbn = {978-3-86956-493-7}, issn = {1614-6492}, doi = {10.25932/publishup-47365}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-473654}, pages = {180}, year = {2020}, abstract = {The Jewish family has been the subject of much admiration and analysis, criticism and myth-making, not just but especially in modern times. As a field of inquiry, its place is at the intersection - or in the shadow - of the great topics in Jewish Studies and its contributing disciplines. Among them are the modernization and privatization of Judaism and Jewish life; integration and distinctiveness of Jews as individuals and as a group; gender roles and education. These and related questions have been the focus of modern Jewish family research, which took shape as a discipline in the 1910s. This issue of PaRDeS traces the origins of academic Jewish family research and takes stock of its development over a century, with its ruptures that have added to the importance of familial roots and continuities. A special section retrieves the founder of the field, Arthur Czellitzer (1871-1943), his biography and work from oblivion and places him in the context of early 20th-century science and Jewish life. The articles on current questions of Jewish family history reflect the topic's potential for shedding new light on key questions in Jewish Studies past and present. Their thematic range - from 13th-century Yiddish Arthurian romances via family-based business practices in 19th-century Hungary and Germany, to concepts of Jewish parenthood in Imperial Russia - illustrates the broad interest in Jewish family research as a paradigm for early modern and modern Jewish Studies.}, language = {en} } @misc{PohlenzGrindelDahlmannetal.2013, author = {Pohlenz, Philipp and Grindel, Elisabeth and Dahlmann, Olaf and Harder, Benjamin and Obst, Barbara and Steinbach, Sylvia and Schmahl, Katrin and M{\"u}ller, Katja and Steible, Stefanie and Isakowitz, Marcel and Lambrecht, Alyssa}, title = {Portal alumni}, series = {Das Ehemaligen-Magazin der Universit{\"a}t Potsdam}, journal = {Das Ehemaligen-Magazin der Universit{\"a}t Potsdam}, number = {10}, organization = {Stabsstelle Studierendenmarketing/Alumniprogramm Im Auftrag der Pr{\"a}sidentin der Universit{\"a}t Potsdam}, issn = {1613-2343}, doi = {10.25932/publishup-44525}, url = {http://nbn-resolving.de/urn:nbn:de:kobv:517-opus4-445251}, pages = {56}, year = {2013}, abstract = {Begonnen hat es um 1900 mit Qualit{\"a}tskontrolle, sp{\"a}ter folgte Qualit{\"a}tspr{\"u}fung und seit Mitte der 90er Jahre hat das Thema Qualit{\"a}tsmanagement Einzug gehalten in alle Bereiche von Politik und Gesellschaft. Im Gesundheitswesen, der Justiz und auch an vielen Hochschulen wurden spezielle Stellen eingerichtet, die sich gezielt mit der Umsetzung von Qualit{\"a}tsentwicklung oder Qualit{\"a}tsmanagement befassen. Das {\"u}bergeordnete Ziel bei Einf{\"u}hrung eines Qualit{\"a}tsmanagements ist es, die Wettbewerbsf{\"a}higkeit der Organisation sowie auch die Zufriedenheit der Mitglieder der Institutionen und weiterer Stakeholder zu steigern, indem die Qualit{\"a}t der T{\"a}tigkeiten und der jeweiligen Rahmenbedingungen erhalten und optimiert wird. Mit der bewussten Entscheidung zur Qualit{\"a}tssicherung und -entwicklung beginnt ein fortlaufender Prozess, der stetig intensiv begleitet werden muss. Qualit{\"a}tsmanagement wirkt nachhaltig, in dem durch die Schaffung regelm{\"a}ßiger und systematischer Strukturen und Prozesse auch zuk{\"u}nftig den beteiligten Personen ein optimales Handeln entsprechend der dann geltenden Bedingungen erm{\"o}glicht wird. Portal alumni widmet sich in seinem zehnten Heft diesem Thema und hat Absolventen der Universit{\"a}t Potsdam nach ihrem T{\"a}tigkeitsfeld im Qualit{\"a}tsmanagement und den entsprechenden Erfolgen befragt. Dabei zeigt sich, dass Ehemalige Einsatzbereiche in Wirtschaft und Unternehmen aber auch in Sport, Bildung oder Hochschulen gefunden haben. Daneben berichten wir in diesem Heft von einem Projekt des Career Service, dem Schnupperjobben, und auch die Berichte {\"u}ber die Geschehnisse an Ihrer Alma mater kommen nicht zu kurz.}, language = {de} } @article{FeinerTeschnerTeschneretal.2019, author = {Feiner, Rebecca Christine and Teschner, Julian and Teschner, Kathrin E. and Radukic, Marco T. and Baumann, Tobias and Hagen, Sven and Hannappel, Yvonne and Biere, Niklas and Anselmetti, Dario and Arndt, Katja Maren and M{\"u}ller, Kristian Mark}, title = {rAAV Engineering for Capsid-Protein Enzyme Insertions and Mosaicism Reveals Resilience to Mutational, Structural and Thermal Perturbations}, series = {International journal of molecular sciences}, volume = {20}, journal = {International journal of molecular sciences}, number = {22}, publisher = {MDPI}, address = {Basel}, issn = {1422-0067}, doi = {10.3390/ijms20225702}, pages = {19}, year = {2019}, abstract = {Recombinant adeno-associated viruses (rAAV) provide outstanding options for customization and superior capabilities for gene therapy. To access their full potential, facile genetic manipulation is pivotal, including capsid loop modifications. Therefore, we assessed capsid tolerance to modifications of the structural VP proteins in terms of stability and plasticity. Flexible glycine-serine linkers of increasing sizes were, at the genetic level, introduced into the 587 loop region of the VP proteins of serotype 2, the best studied AAV representative. Analyses of biological function and thermal stability with respect to genome release of viral particles revealed structural plasticity. In addition, insertion of the 29 kDa enzyme beta-lactamase into the loop region was tested with a complete or a mosaic modification setting. For the mosaic approach, investigation of VP2 trans expression revealed that a Kozak sequence was required to prevent leaky scanning. Surprisingly, even the full capsid modification with beta-lactamase allowed for the assembly of capsids with a concomitant increase in size. Enzyme activity assays revealed lactamase functionality for both rAAV variants, which demonstrates the structural robustness of this platform technology.}, language = {en} } @article{BringmannMutanyattaComarMaksimenkaetal.2008, author = {Bringmann, Gerhard and Mutanyatta-Comar, Joan and Maksimenka, Katja and Wanjohi, John M. and Heydenreich, Matthias and Brun, Reto and M{\"u}ller, Werner E. G. and Peter, Martin G. and Midiwo, Jacob O. and Yenesew, Abiy}, title = {Joziknipholones A and B : the first dimeric phenylanthraquinones, from the roots of Bulbine frutescens}, issn = {0947-6539}, year = {2008}, abstract = {From the roots of the African plant Bulbine frutescens (Asphodelaceae), two unprecedented novel dimeric phenylanthraquinones, named joziknipholones A and B, possessing axial and centrochirality, were isolated, together with six known compounds. Structural elucidation of the new metabolites was achieved by spectroscopic and chiroptical methods, by reductive cleavage of the central bond between the monomeric phenylanthraquinone and -anthrone portions with sodium dithionite, and by quantum chemical CD calculations. Based on the recently revised absolute axial configuration of the parent phenylanthraquinones, knipholone and knipholone anthrone, the new dimers were attributed to possess the P- configuration (i.e., with the acetyl portions below the anthraquinone plane) at both axes in the case of joziknipholone A, whereas in joziknipholone B, the knipholone part was found to be M-configured. Joziknipholones A and B are active against the chloroquine resistant strain K1 of the malaria pathogen, Plasmodium falciparum, and show moderate activity against murine leukemic lymphoma L5178y cells.}, language = {en} } @article{StaabWalossekNellessenetal.2010, author = {Staab, Paul R. and Walossek, J{\"o}rg and Nellessen, David and Gr{\"u}nberg, Raik and Arndt, Katja Maren and M{\"u}ller, Kristian M.}, title = {SynBioWave : a real-time communication platform for molecular and synthetic biology}, issn = {1367-4803}, doi = {10.1093/bioinformatics/btq518}, year = {2010}, abstract = {Synthetic Biology is advanced by many users and relies on the assembly of genetic elements to devices, systems and finally genomes. SynBioWave is a software suite that enables multiple distributed users to analyze and construct genetic parts in real-time collaboration. It builds on Google Wave and provides an extensible robot-robot-user communication framework, a menu driven user interface, biological data handling including DAS and an internal database communication. We demonstrate its use by implementing robots for gene-data retrieval, manipulation and display. The initial development of SynBioWave demonstrates the power of the underlying Google Wave protocol for Synthetic Biology and lays the foundation for continuous and user-friendly extensions. Specialized wave-robots with a manageable set of capabilities will divide and conquer the complex task of creating a genome in silico.}, language = {en} } @article{SpeckRaeuberKuekenshoeneretal.2013, author = {Speck, Janina and R{\"a}uber, Christina and K{\"u}kensh{\"o}ner, Tim and Niem{\"o}ller, Christoph and Mueller, Katelyn J. and Schleberger, Paula and Dondapati, Padmarupa and Hecky, Jochen and Arndt, Katja Maren and M{\"u}ller, Kristian M.}, title = {TAT hitchhiker selection expanded to folding helpers, multimeric interactions and combinations with protein fragment complementation}, series = {Protein engineering design \& selection}, volume = {26}, journal = {Protein engineering design \& selection}, number = {3}, publisher = {Oxford Univ. Press}, address = {Oxford}, issn = {1741-0126}, doi = {10.1093/protein/gzs098}, pages = {225 -- 242}, year = {2013}, abstract = {The twin-arginine translocation (TAT) pathway of the bacterial cytoplasmic membrane mediates translocation only of proteins that accomplished a native-like conformation. We deploy this feature in modular selection systems for directed evolution, in which folding helpers as well as dimeric or oligomeric proteinprotein interactions enable TAT-dependent translocation of the resistance marker TEM -lactamase (L). Specifically, we demonstrate and analyze selection of (i) enhancers for folding by direct TAT translocation selection of a target protein interposed between the TorA signal sequence and L, (ii) dimeric or oligomeric proteinprotein interactions by hitchhiker translocation (HiT) selection of proteins fused to the TorA signal sequence and to the L, respectively and (iii) heterotrimeric proteinprotein interactions by combining HiT with protein fragment complementation selection of proteins fused to two split L fragments and TorA, respectively. The lactamase fragments were additionally engineered for improved activity and stability. Applicability was benchmarked with interaction partners of known affinity and multimerization whereby cellular fitness correlated well with biophysical protein properties. Ultimately, the HiT selection was employed to identify peptides, which specifically bind to leukemia- and melanoma-relevant target proteins (MITF and ETO) by coiled-coil or tetra-helix-bundle formation with high affinity. The various versions of TAT selection led to inhibiting peptides (iPEPs) of disease-promoting interactions and enabled so far difficult to achieve selections.}, language = {en} } @article{LudwigMueller2012, author = {Ludwig, Joachim and M{\"u}ller, Katja}, title = {Forschungsstand zu Alphabetisierung und Grundbildung}, isbn = {978-3-7639-5067-6}, year = {2012}, language = {de} } @article{Mueller2012, author = {M{\"u}ller, Katja}, title = {Lernforschung - Lernbegr{\"u}ndungstypen bei Alphakurs-Teilnehmenden}, isbn = {978-3-7639-5067-6}, year = {2012}, language = {de} } @article{BaumannArndtMueller2013, author = {Baumann, Tobias and Arndt, Katja Maren and M{\"u}ller, Kristian M.}, title = {Directional cloning of DNA fragments using deoxyinosine-containing oligonucleotides and endonuclease V}, series = {BMC biotechnology}, volume = {13}, journal = {BMC biotechnology}, number = {10}, publisher = {BioMed Central}, address = {London}, issn = {1472-6750}, doi = {10.1186/1472-6750-13-81}, pages = {11}, year = {2013}, abstract = {Background: DNA fragments carrying internal recognition sites for the restriction endonucleases intended for cloning into a target plasmid pose a challenge for conventional cloning. Results: A method for directional insertion of DNA fragments into plasmid vectors has been developed. The target sequence is amplified from a template DNA sample by PCR using two oligonucleotides each containing a single deoxyinosine base at the third position from the 5' end. Treatment of such PCR products with endonuclease V generates 3' protruding ends suitable for ligation with vector fragments created by conventional restriction endonuclease reactions. Conclusions: The developed approach generates terminal cohesive ends without the use of Type II restriction endonucleases, and is thus independent from the DNA sequence. Due to PCR amplification, minimal amounts of template DNA are required. Using the robust Taq enzyme or a proofreading Pfu DNA polymerase mutant, the method is applicable to a broad range of insert sequences. Appropriate primer design enables direct incorporation of terminal DNA sequence modifications such as tag addition, insertions, deletions and mutations into the cloning strategy. Further, the restriction sites of the target plasmid can be either retained or removed.}, language = {en} } @article{SpeckArndtMueller2011, author = {Speck, Janina and Arndt, Katja Maren and M{\"u}ller, Kristian M.}, title = {Efficient phage display of intracellularly folded proteins mediated by the TAT pathway}, series = {Protein engineering design \& selection}, volume = {24}, journal = {Protein engineering design \& selection}, number = {6}, publisher = {Oxford Univ. Press}, address = {Oxford}, issn = {1741-0126}, doi = {10.1093/protein/gzr001}, pages = {473 -- 484}, year = {2011}, abstract = {Phage display with filamentous phages is widely applied and well developed, yet proteins requiring a cytoplasmic environment for correct folding still defy attempts at functional display. To extend applicability of phage display, we employed the twin-arginine translocation (TAT) pathway to incorporate proteins fused to the C-terminal domain of the geneIII protein into phage particles. We investigated functionality and display level of fluorescent proteins depending on the translocation pathway, which was the TAT, general secretory (SEC) or signal recognition particle (SRP) pathway mediated by the TorA, PelB or DsbA signal sequences, respectively. Importantly, for green fluorescent protein, yellow fluorescent protein and cyan fluorescent protein, only TAT, but not SEC or SRP, translocation led to fluorescence of purified phage particles, although all three proteins could be displayed regardless of the translocation pathway. In contrast, the monomeric red fluorescent protein mCherry was functionally displayed regardless of the translocation pathway. Hence, correct folding and fluorophor formation of mCherry is not limited to the cytosol. Furthermore, we successfully displayed firefly luciferase as well as an 83 kDa argonaute protein, both containing free cysteines. This demonstrates broad applicability of the TAT-mediated phagemid system for the display of proteins requiring cytoplasmic factors for correct folding and should prove useful for the display of proteins requiring incorporation of co-factors or oligomerization to gain function.}, language = {en} } @inproceedings{KuekenshoenerJeanChristophSpecketal.2011, author = {K{\"u}kensh{\"o}ner, Tim and Jean-Christoph, N. and Speck, J. and M{\"u}ller, Kristian M. and Arndt, Katja Maren}, title = {Targeting the microphthalmia associated transcription factor coiled coil domain with interfering peptides}, series = {The FEBS journal}, volume = {278}, booktitle = {The FEBS journal}, number = {6}, publisher = {Wiley-Blackwell}, address = {Malden}, issn = {1742-464X}, pages = {159 -- 159}, year = {2011}, language = {en} } @article{SpeckHeckyTametal.2012, author = {Speck, Janina and Hecky, Jochen and Tam, Heng-Keat and Arndt, Katja Maren and Einsle, Oliver and M{\"u}ller, Kristian M.}, title = {Exploring the molecular linkage of protein stability traits for enzyme optimization by iterative truncation and evolution}, series = {Biochemistry}, volume = {51}, journal = {Biochemistry}, number = {24}, publisher = {American Chemical Society}, address = {Washington}, issn = {0006-2960}, doi = {10.1021/bi2018738}, pages = {4850 -- 4867}, year = {2012}, abstract = {The stability of proteins is paramount for their therapeutic and industrial use and, thus, is a major task for protein engineering. Several types of chemical and physical stabilities are desired, and discussion revolves around whether each stability trait needs to be addressed separately and how specific and compatible stabilizing mutations act. We demonstrate a stepwise perturbation-compensation strategy, which identifies mutations rescuing the activity of a truncated TEM beta-lactamase. Analyses relating structural stress with the external stresses of heat, denaturants, and proteases reveal our second-site suppressors as general stability centers that also improve the full-length enzyme. A library of lactamase variants truncated by 15 N-terminal and three C-terminal residues (Bla-N Delta 15C Delta 3) was subjected to activity selection and DNA shuffling. The resulting clone with the best in vivo performance harbored eight mutations, surpassed the full-length wild-type protein by 5.3 degrees C in T-m, displayed significantly higher catalytic activity at elevated temperatures, and showed delayed guanidine-induced denaturation. The crystal structure of this mutant was determined and provided insights into its stability determinants. Stepwise reconstitution of the N- and C-termini increased its thermal, denaturant, and proteolytic resistance successively, leading to a full-length enzyme with a T-m increased by 15.3 degrees C and a half-denaturation concentration shifted from 0.53 to 1.75 M guanidinium relative to that of the wild type. These improvements demonstrate that iterative truncation-optimization cycles can exploit stability-trait linkages in proteins and are exceptionally suited for the creation of progressively stabilized variants and/or downsized proteins without the need for detailed structural or mechanistic information.}, language = {en} }